Hardcode Bio-Rad in OI output
UniqueId replacement for attachments Write input PDSF in output after EOF GetPropertyValue for MoveMatchingFiles ProcessDataStandardFormat over Tuple MoveMatchingFiles to use ProcessDataStandardFormatMapping
This commit is contained in:
@ -5,16 +5,70 @@ using Adaptation.Shared.Duplicator;
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using Adaptation.Shared.Methods;
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using System;
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using System.Collections.Generic;
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using System.Collections.ObjectModel;
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using System.IO;
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using System.Linq;
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using System.Text;
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using System.Text.Json;
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using System.Threading;
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namespace Adaptation.FileHandlers.MoveMatchingFiles;
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#nullable enable
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public class FileRead : Shared.FileRead, IFileRead
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{
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internal class PreWith
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{
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internal string MatchingFile { get; private set; }
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internal string CheckFile { get; private set; }
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internal string ErrFile { get; private set; }
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internal string CheckDirectory { get; private set; }
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internal string NoWaitDirectory { get; private set; }
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internal PreWith(string matchingFile, string checkFile, string errFile, string checkDirectory, string noWaitDirectory)
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{
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MatchingFile = matchingFile;
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CheckFile = checkFile;
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ErrFile = errFile;
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CheckDirectory = checkDirectory;
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NoWaitDirectory = noWaitDirectory;
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}
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}
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internal class Pre
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{
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internal string MatchingFile { get; private set; }
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internal string CheckFile { get; private set; }
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internal Pre(string matchingFile, string checkFile)
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{
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MatchingFile = matchingFile;
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CheckFile = checkFile;
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}
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}
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internal class Post
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{
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internal string ErrFile { get; private set; }
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internal string CheckFile { get; private set; }
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internal Post(string checkFile, string errFile)
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{
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ErrFile = errFile;
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CheckFile = checkFile;
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}
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}
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private readonly ProcessDataStandardFormatMapping _ProcessDataStandardFormatMapping;
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public FileRead(ISMTP smtp, Dictionary<string, string> fileParameter, string cellInstanceName, int? connectionCount, string cellInstanceConnectionName, FileConnectorConfiguration fileConnectorConfiguration, string equipmentTypeName, string parameterizedModelObjectDefinitionType, IList<ModelObjectParameterDefinition> modelObjectParameters, string equipmentDictionaryName, Dictionary<string, List<long>> dummyRuns, Dictionary<long, List<string>> staticRuns, bool useCyclicalForDescription, bool isEAFHosted) :
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base(new Description(), false, smtp, fileParameter, cellInstanceName, connectionCount, cellInstanceConnectionName, fileConnectorConfiguration, equipmentTypeName, parameterizedModelObjectDefinitionType, modelObjectParameters, equipmentDictionaryName, dummyRuns, staticRuns, useCyclicalForDescription, isEAFHosted: connectionCount is null)
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{
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@ -27,6 +81,12 @@ public class FileRead : Shared.FileRead, IFileRead
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throw new Exception(cellInstanceConnectionName);
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if (!_IsDuplicator)
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throw new Exception(cellInstanceConnectionName);
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string processDataStandardFormatMappingOldColumnNames = GetPropertyValue(cellInstanceConnectionName, modelObjectParameters, "Process.Data.Standard.Format.Mapping.Old.Column.Names");
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string processDataStandardFormatMappingNewColumnNames = GetPropertyValue(cellInstanceConnectionName, modelObjectParameters, "Process.Data.Standard.Format.Mapping.New.Column.Names");
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string processDataStandardFormatMappingColumnIndices = GetPropertyValue(cellInstanceConnectionName, modelObjectParameters, "Process.Data.Standard.Format.Mapping.Column.Indices");
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_ProcessDataStandardFormatMapping = GetProcessDataStandardFormatMapping(processDataStandardFormatMappingOldColumnNames,
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processDataStandardFormatMappingNewColumnNames,
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processDataStandardFormatMappingColumnIndices);
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}
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void IFileRead.Move(Tuple<string, Test[], JsonElement[], List<FileInfo>> extractResults, Exception exception)
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@ -41,7 +101,8 @@ public class FileRead : Shared.FileRead, IFileRead
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Move(extractResults);
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}
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void IFileRead.WaitForThread() => WaitForThread(thread: null, threadExceptions: null);
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void IFileRead.WaitForThread() =>
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WaitForThread(thread: null, threadExceptions: null);
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string IFileRead.GetEventDescription()
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{
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@ -88,7 +149,7 @@ public class FileRead : Shared.FileRead, IFileRead
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DateTime dateTime = DateTime.Now;
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results = GetExtractResult(reportFullPath, dateTime);
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if (results.Item3 is null)
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results = new Tuple<string, Test[], JsonElement[], List<FileInfo>>(results.Item1, Array.Empty<Test>(), JsonSerializer.Deserialize<JsonElement[]>("[]"), results.Item4);
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results = new Tuple<string, Test[], JsonElement[], List<FileInfo>>(results.Item1, Array.Empty<Test>(), JsonSerializer.Deserialize<JsonElement[]>("[]") ?? throw new Exception(), results.Item4);
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if (results.Item3.Length > 0 && _IsEAFHosted)
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WritePDSF(this, results.Item3);
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UpdateLastTicksDuration(DateTime.Now.Ticks - dateTime.Ticks);
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@ -104,7 +165,69 @@ public class FileRead : Shared.FileRead, IFileRead
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return results;
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}
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private static List<string> GetSearchDirectories(int numberLength, string parentDirectory)
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private static ProcessDataStandardFormatMapping GetProcessDataStandardFormatMapping(string processDataStandardFormatMappingOldColumnNames, string processDataStandardFormatMappingNewColumnNames, string processDataStandardFormatMappingColumnIndices)
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{
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ProcessDataStandardFormatMapping result;
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string[] segmentsB;
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List<string> distinct = new();
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Dictionary<string, string> keyValuePairs = new();
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string args4 = "Time,HeaderUniqueId,UniqueId,Date";
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string args5 = "Thickness 14 3mm Edge Mean,Thickness 14 3mm Edge % from R/2,Thickness 14 5mm Edge Mean,Thickness 14 5mm Edge % from R/2,Thickness 14 Center Mean,Thickness 14 Average,Thickness 14 Std Dev,Thickness 14 R/2 Mean";
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string args6 = "Thickness01,Thickness02,Thickness03,Thickness04,Thickness05,Thickness06,Thickness07,Thickness08,Thickness09,Thickness10,Thickness11,Thickness12,Thickness13,Thickness14";
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string args7 = "Test|EventId,Employee|Operator,Lot|Wafer,MeanThickness|WaferMeanThickness,RVThickness|RadialVariationThickness,ThicknessFourteen3mmEdgeMean|Thickness 14 3mm Edge Mean,ThicknessFourteen3mmEdgePercent|Thickness 14 3mm Edge % from R/2,ThicknessFourteen5mmEdgeMean|Thickness 14 5mm Edge Mean,ThicknessFourteen5mmEdgePercent|Thickness 14 5mm Edge % from R/2,ThicknessFourteenCenterMean|Thickness 14 Center Mean,ThicknessFourteenCriticalPointsAverage|Thickness 14 Average,ThicknessFourteenCriticalPointsStdDev|Thickness 14 Std Dev,ThicknessFourteenMeanFrom|Thickness 14 R/2 Mean,|BIORAD2";
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// string args8 = "Time,A_LOGISTICS,B_LOGISTICS,Test,Count,Index,MesEntity,Date,Employee,Lot,PSN,Reactor,Recipe,Cassette,HeaderUniqueId,Layer,PassFail,Position,RDS,Title,UniqueId,Wafer,Zone,MeanThickness,RVThickness,StdDev,Thickness,Slot,ThicknessFourteen3mmEdgeMean,ThicknessFourteen3mmEdgePercent,ThicknessFourteen5mmEdgeMean,ThicknessFourteen5mmEdgePercent,ThicknessFourteenCenterMean,ThicknessFourteenCriticalPointsAverage,ThicknessFourteenCriticalPointsStdDev,ThicknessFourteenMeanFrom,Thickness01,Thickness02,Thickness03,Thickness04,Thickness05,Thickness06,Thickness07,Thickness08,Thickness09,Thickness10,Thickness11,Thickness12,Thickness13,Thickness14";
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// string args9 = "Time,A_LOGISTICS,B_LOGISTICS,Count,Sequence,MesEntity,Index,Title,Recipe,DateTime,Operator,Batch,Cassette,UsedLast,Wafer,Position,Thickness,WaferMeanThickness,StdDev,PassFail,Line,RadialVariationThickness,Slot,RDS,PSN,Reactor,Layer,Zone,Employee,InferredLot,Thickness 14 3mm Edge Mean,Thickness 14 3mm Edge % from R/2,Thickness 14 5mm Edge Mean,Thickness 14 5mm Edge % from R/2,Thickness 14 Center Mean,Thickness 14 Average,Thickness 14 Std Dev,Thickness 14 R 2/Mean,Thickness01,Thickness02,Thickness03,Thickness04,Thickness05,Thickness06,Thickness07,Thickness08,Thickness09,Thickness10,Thickness11,Thickness12,Thickness13,Thickness14,EventId";
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// string args10 = "0,1,2,52,3,6,5,9,10,14,24,25,8,12,-1,26,19,15,23,7,-1,14,27,17,21,18,16,22,30,31,32,33,34,35,36,37,38,39,40,41,42,43,44,45,46,47,48,49,50,51";
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string[] segments = args7.Split(',');
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ReadOnlyCollection<string> ignoreColumns = new(args4.Split(','));
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ReadOnlyCollection<string> backfillColumns = new(args5.Split(','));
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ReadOnlyCollection<string> indexOnlyColumns = new(args6.Split(','));
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ReadOnlyCollection<string> newColumnNames = new(processDataStandardFormatMappingNewColumnNames.Split(','));
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ReadOnlyCollection<string> oldColumnNames = new(processDataStandardFormatMappingOldColumnNames.Split(','));
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ReadOnlyCollection<int> columnIndices = new(processDataStandardFormatMappingColumnIndices.Split(',').Select(int.Parse).ToArray());
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foreach (string segment in segments)
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{
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segmentsB = segment.Split('|');
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if (segmentsB.Length != 2)
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continue;
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if (distinct.Contains(segmentsB[0]))
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continue;
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distinct.Add(segmentsB[0]);
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keyValuePairs.Add(segmentsB[0], segmentsB[1]);
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}
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result = new(backfillColumns: backfillColumns,
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columnIndices: columnIndices,
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newColumnNames: newColumnNames,
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ignoreColumns: ignoreColumns,
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indexOnlyColumns: indexOnlyColumns,
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keyValuePairs: new(keyValuePairs),
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oldColumnNames: oldColumnNames);
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return result;
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}
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private static ReadOnlyCollection<PreWith> GetPreWithCollection(ReadOnlyCollection<Pre> preCollection)
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{
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List<PreWith> results = new();
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string errFile;
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PreWith preWith;
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string? checkDirectory;
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string noWaitDirectory;
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foreach (Pre pre in preCollection)
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{
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errFile = string.Concat(pre.CheckFile, ".err");
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checkDirectory = Path.GetDirectoryName(pre.CheckFile);
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if (string.IsNullOrEmpty(checkDirectory))
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continue;
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if (!Directory.Exists(checkDirectory))
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_ = Directory.CreateDirectory(checkDirectory);
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noWaitDirectory = Path.Combine(checkDirectory, "NoWaitDirectory");
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preWith = new(pre.MatchingFile, pre.CheckFile, errFile, checkDirectory, noWaitDirectory);
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results.Add(preWith);
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}
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return results.AsReadOnly();
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}
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private static ReadOnlyCollection<string> GetSearchDirectories(int numberLength, string parentDirectory)
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{
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List<string> results = new();
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string[] directories = Directory.GetDirectories(parentDirectory, "*", SearchOption.TopDirectoryOnly);
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@ -115,10 +238,136 @@ public class FileRead : Shared.FileRead, IFileRead
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results.Add(directory);
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}
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results.Sort();
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return results.AsReadOnly();
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}
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private static void CreatePointerFile(int numberLength, string parentDirectory, ReadOnlyCollection<string> matchingFiles)
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{
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string checkFile;
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string writeFile;
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string? directoryName;
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int parentDirectoryLength = parentDirectory.Length;
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foreach (string matchingFile in matchingFiles)
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{
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directoryName = Path.GetDirectoryName(matchingFile);
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if (directoryName is null)
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continue;
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checkFile = $"{matchingFile[0]}{directoryName.Substring(parentDirectoryLength + numberLength + 1)}";
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writeFile = Path.Combine(parentDirectory, $"{directoryName.Substring(parentDirectory.Length + 1, numberLength)}.txt");
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if (File.Exists(writeFile))
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continue;
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File.AppendAllLines(writeFile, new string[] { parentDirectory, matchingFile, directoryName, checkFile });
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}
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}
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private static ReadOnlyCollection<Pre> GetPreCollection(int numberLength, string parentDirectory, ReadOnlyCollection<string> matchingFiles)
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{
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List<Pre> results = new();
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Pre pre;
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string checkFile;
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int parentDirectoryLength = parentDirectory.Length;
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foreach (string matchingFile in matchingFiles)
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{
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checkFile = $"{matchingFile[0]}{matchingFile.Substring(parentDirectoryLength + numberLength + 1)}";
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pre = new(matchingFile, checkFile);
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results.Add(pre);
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}
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return results.AsReadOnly();
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}
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private void MoveCollection(DateTime dateTime, ProcessDataStandardFormat? processDataStandardFormat, ReadOnlyCollection<PreWith> preWithCollection)
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{
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ReadOnlyCollection<Post> postCollection = GetPostCollection(dateTime, processDataStandardFormat, preWithCollection);
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if (postCollection.Count != 0)
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{
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Thread.Sleep(500);
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StringBuilder stringBuilder = new();
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foreach (Post post in postCollection)
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{
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if (File.Exists(post.ErrFile))
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_ = stringBuilder.AppendLine(File.ReadAllText(post.ErrFile));
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if (File.Exists(post.CheckFile))
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_ = stringBuilder.AppendLine($"<{post.CheckFile}> was not consumed by the end!");
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}
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if (stringBuilder.Length > 0)
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throw new Exception(stringBuilder.ToString());
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}
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}
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private ReadOnlyCollection<Post> GetPostCollection(DateTime dateTime, ProcessDataStandardFormat? processDataStandardFormat, ReadOnlyCollection<PreWith> preWithCollection)
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{
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List<Post> results = new();
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Post post;
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long preWait;
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foreach (PreWith preWith in preWithCollection)
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{
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if (processDataStandardFormat is null)
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File.Move(preWith.MatchingFile, preWith.CheckFile);
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else
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{
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ProcessDataStandardFormat.Write(preWith.CheckFile, processDataStandardFormat);
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File.Delete(preWith.MatchingFile);
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}
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if (Directory.Exists(preWith.NoWaitDirectory))
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{
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post = new(preWith.CheckFile, preWith.ErrFile);
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results.Add(post);
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continue;
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}
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if (_FileConnectorConfiguration?.FileHandleWaitTime is null)
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preWait = DateTime.Now.AddMilliseconds(1234).Ticks;
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else
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preWait = DateTime.Now.AddMilliseconds(_FileConnectorConfiguration.FileHandleWaitTime.Value).Ticks;
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for (short i = 0; i < short.MaxValue; i++)
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{
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if (DateTime.Now.Ticks > preWait)
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break;
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Thread.Sleep(500);
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}
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for (int i = 0; i < int.MaxValue; i++)
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{
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if (File.Exists(preWith.ErrFile))
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throw new Exception(File.ReadAllText(preWith.ErrFile));
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if (!File.Exists(preWith.CheckFile))
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break;
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if (new TimeSpan(DateTime.Now.Ticks - dateTime.Ticks).TotalSeconds > _BreakAfterSeconds)
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throw new Exception($"Not all files were consumed after {_BreakAfterSeconds} second(s)!");
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Thread.Sleep(500);
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}
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}
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return results.AsReadOnly();
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}
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private Tuple<string, Test[], JsonElement[], List<FileInfo>> GetExtractResult(string reportFullPath, DateTime dateTime)
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{
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Tuple<string, Test[], JsonElement[], List<FileInfo>> results = new(string.Empty, Array.Empty<Test>(), Array.Empty<JsonElement>(), new List<FileInfo>());
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ProcessDataStandardFormat? processDataStandardFormat = ProcessDataStandardFormat.GetProcessDataStandardFormat(reportFullPath, _ProcessDataStandardFormatMapping);
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if (processDataStandardFormat is not null)
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_Logistics = new Logistics(reportFullPath, processDataStandardFormat);
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else
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{
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processDataStandardFormat = ProcessDataStandardFormat.GetProcessDataStandardFormat(reportFullPath);
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_Logistics = new Logistics(reportFullPath, processDataStandardFormat);
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processDataStandardFormat = null;
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}
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SetFileParameterLotIDToLogisticsMID();
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int numberLength = 2;
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long ticks = dateTime.Ticks;
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string parentParentDirectory = GetParentParent(reportFullPath);
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ReadOnlyCollection<string> searchDirectories = GetSearchDirectories(numberLength, parentParentDirectory);
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ReadOnlyCollection<string> matchingFiles = GetMatchingFiles(ticks, reportFullPath, searchDirectories);
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if (matchingFiles.Count != searchDirectories.Count)
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throw new Exception($"Didn't find all files after {_BreakAfterSeconds} second(s)!");
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try
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{ CreatePointerFile(numberLength, parentParentDirectory, matchingFiles); }
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catch (Exception) { }
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ReadOnlyCollection<Pre> preCollection = GetPreCollection(numberLength, parentParentDirectory, matchingFiles);
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ReadOnlyCollection<PreWith> preWithCollection = GetPreWithCollection(preCollection);
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MoveCollection(dateTime, processDataStandardFormat, preWithCollection);
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return results;
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}
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private List<string> GetMatchingFiles(long ticks, string reportFullPath, List<string> searchDirectories)
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private ReadOnlyCollection<string> GetMatchingFiles(long ticks, string reportFullPath, ReadOnlyCollection<string> searchDirectories)
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{
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List<string> results = new();
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string[] found;
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@ -137,129 +386,7 @@ public class FileRead : Shared.FileRead, IFileRead
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break;
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}
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}
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return results;
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}
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private static List<(string matchingFile, string checkFile)> GetCollection(int numberLength, string parentDirectory, List<string> matchingFiles)
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{
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List<(string matchingFile, string checkFile)> results = new();
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string checkFile;
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int parentDirectoryLength = parentDirectory.Length;
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foreach (string matchingFile in matchingFiles)
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{
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checkFile = $"{matchingFile[0]}{matchingFile.Substring(parentDirectoryLength + numberLength + 1)}";
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results.Add(new(matchingFile, checkFile));
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}
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return results;
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}
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private static List<(string, string, string, string, string)> GetCollection(List<(string matchingFile, string checkFile)> collection)
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{
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List<(string, string, string, string, string)> results = new();
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string errFile;
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string checkDirectory;
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string noWaitDirectory;
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foreach ((string matchingFile, string checkFile) in collection)
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{
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errFile = string.Concat(checkFile, ".err");
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checkDirectory = Path.GetDirectoryName(checkFile);
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if (!Directory.Exists(checkDirectory))
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_ = Directory.CreateDirectory(checkDirectory);
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noWaitDirectory = Path.Combine(checkDirectory, "NoWaitDirectory");
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results.Add(new(matchingFile, checkFile, errFile, checkDirectory, noWaitDirectory));
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}
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return results;
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}
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private void MoveCollection(DateTime dateTime, List<(string matchingFile, string checkFile)> collection)
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{
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long preWait;
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List<(string checkFile, string errFile)> postCollection = new();
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foreach ((string matchingFile, string checkFile, string errFile, string checkDirectory, string noWaitDirectory) in GetCollection(collection))
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{
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File.Move(matchingFile, checkFile);
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if (Directory.Exists(noWaitDirectory))
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{
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postCollection.Add(new(checkFile, errFile));
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continue;
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}
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if (_FileConnectorConfiguration?.FileHandleWaitTime is null)
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preWait = DateTime.Now.AddMilliseconds(1234).Ticks;
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else
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preWait = DateTime.Now.AddMilliseconds(_FileConnectorConfiguration.FileHandleWaitTime.Value).Ticks;
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for (short i = 0; i < short.MaxValue; i++)
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{
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if (DateTime.Now.Ticks > preWait)
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break;
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Thread.Sleep(500);
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}
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for (int i = 0; i < int.MaxValue; i++)
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{
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if (File.Exists(errFile))
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throw new Exception(File.ReadAllText(errFile));
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if (!File.Exists(checkFile))
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break;
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if (new TimeSpan(DateTime.Now.Ticks - dateTime.Ticks).TotalSeconds > _BreakAfterSeconds)
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throw new Exception($"Not all files were consumed after {_BreakAfterSeconds} second(s)!");
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Thread.Sleep(500);
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}
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}
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if (postCollection.Count != 0)
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{
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Thread.Sleep(500);
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StringBuilder stringBuilder = new();
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foreach ((string checkFile, string errFile) in postCollection)
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{
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if (File.Exists(errFile))
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_ = stringBuilder.AppendLine(File.ReadAllText(errFile));
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if (File.Exists(checkFile))
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||||
_ = stringBuilder.AppendLine($"<{checkFile}> was not consumed by the end!");
|
||||
}
|
||||
if (stringBuilder.Length > 0)
|
||||
throw new Exception(stringBuilder.ToString());
|
||||
}
|
||||
}
|
||||
|
||||
private static void CreatePointerFile(int numberLength, string parentDirectory, List<string> matchingFiles)
|
||||
{
|
||||
#nullable enable
|
||||
string checkFile;
|
||||
string writeFile;
|
||||
string? directoryName;
|
||||
int parentDirectoryLength = parentDirectory.Length;
|
||||
foreach (string matchingFile in matchingFiles)
|
||||
{
|
||||
directoryName = Path.GetDirectoryName(matchingFile);
|
||||
if (directoryName is null)
|
||||
continue;
|
||||
checkFile = $"{matchingFile[0]}{directoryName.Substring(parentDirectoryLength + numberLength + 1)}";
|
||||
writeFile = Path.Combine(parentDirectory, $"{directoryName.Substring(parentDirectory.Length + 1, numberLength)}.txt");
|
||||
if (File.Exists(writeFile))
|
||||
continue;
|
||||
File.AppendAllLines(writeFile, new string[] { parentDirectory, matchingFile, directoryName, checkFile });
|
||||
}
|
||||
#nullable disable
|
||||
}
|
||||
|
||||
private Tuple<string, Test[], JsonElement[], List<FileInfo>> GetExtractResult(string reportFullPath, DateTime dateTime)
|
||||
{
|
||||
Tuple<string, Test[], JsonElement[], List<FileInfo>> results = new(string.Empty, null, null, new List<FileInfo>());
|
||||
Tuple<string, string[], string[]> pdsf = ProcessDataStandardFormat.GetLogisticsColumnsAndBody(reportFullPath);
|
||||
_Logistics = new Logistics(reportFullPath, pdsf.Item1);
|
||||
SetFileParameterLotIDToLogisticsMID();
|
||||
int numberLength = 2;
|
||||
long ticks = dateTime.Ticks;
|
||||
string parentParentDirectory = GetParentParent(reportFullPath);
|
||||
List<string> searchDirectories = GetSearchDirectories(numberLength, parentParentDirectory);
|
||||
List<string> matchingFiles = GetMatchingFiles(ticks, reportFullPath, searchDirectories);
|
||||
if (matchingFiles.Count != searchDirectories.Count)
|
||||
throw new Exception($"Didn't find all files after {_BreakAfterSeconds} second(s)!");
|
||||
try
|
||||
{ CreatePointerFile(numberLength, parentParentDirectory, matchingFiles); }
|
||||
catch (Exception) { }
|
||||
List<(string matchingFile, string checkFile)> collection = GetCollection(numberLength, parentParentDirectory, matchingFiles);
|
||||
MoveCollection(dateTime, collection);
|
||||
return results;
|
||||
return results.AsReadOnly();
|
||||
}
|
||||
|
||||
}
|
||||
Reference in New Issue
Block a user